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UniProt

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RESEARCH · 1 SOURCE · arXiv cs.AI

What Does an Ontology Catch? arXiv:2610.37809v1 — Comparing curated, LLM-generated and data-derived ontologies as checkers for LLM agents

This paper studies ontologies themselves as checkers of LLM agents answering questions over knowledge graphs, comparing curated, LLM-generated and data-derived schemas used as prompt context, as checkers, or both. Evaluated on public graphs, UniProt and a private graph of ~10^9 triples across open-weight and proprietary agents, the authors quantify trade-offs between caught errors and false alarms, show curated schemas can contradict their data and often flag many correct answers, and examine whether combining sources or giving agents checker-specific feedback helps.

6.0

MODELS · 1 SOURCE · Google DeepMind

Google Antigravity and ProtNLM identify novel antimicrobial peptide candidate in UniProt

Google describes using its agentic science workbench Antigravity together with ProtNLM, a protein-language model, to annotate millions of unreviewed UniProt sequences and — in a technical walkthrough — prioritize a 97‑amino‑acid bacteriocin (UniProt ID A0A0U0D591, Lactococcin 972 family) predicted to have activity against respiratory pathogens; the lead is undergoing wet‑lab validation. The Antigravity workflow combined sequence-function predictions, BLAST/Swiss‑Prot checks, and AlphaFold structural comparisons in a single interactive session.

7.0